The package includes 3 Matlab-interfaces to the c-code: 1. inference.m An interface to the full inference package, includes several methods for approximate inference: Loopy Belief Propagation, Generalized Belief Propagation, Mean-Field approximation, and 4 monte-carlo sampling methods (Metropolis, Gibbs, Wolff, Swendsen-Wang). Use "help inference" from Matlab to see all options for usage. 2. gbp_preprocess.m and gbp.m These 2 interfaces split Generalized Belief Propagation into the pre-process stage (gbp_preprocess.m) and the inference stage (gbp.m), so the user may use only one of them, or changing some parameters in between. Use "help gbp_preprocess" and "help gbp" from Matlab. 3. simulatedAnnealing.m An interface to the simulated-annealing c-code. This code uses Metropolis sampling method, the same one used for inference. Use "help simulatedAnnealing" from Matlab.
